Information processing by biochemical networks: a dynamic approach
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چکیده
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Material for “ Information Processing by Biochemical Networks : A Dynamic Approach ”
A Stochastic Kinetic Model (SKM) is a continuous-time pure jump process describing the dynamic evolution of the state of the molecular network, x(t). Any change in x(t) is the result of the occurrence of some biochemical reaction, m. The stoichiometric matrix is given by S := [S1, S2, ..., SM ], where the column vector Sm consists of the changes in the number of molecules of each species caused...
متن کاملInformation processing by biochemical networks: a dynamic approach.
Understanding how information is encoded and transferred by biochemical networks is of fundamental importance in cellular and systems biology. This requires analysis of the relationships between the stochastic trajectories of the constituent molecular (or submolecular) species that comprise the network. We describe how to identify conditional independences between the trajectories or time cours...
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ژورنال
عنوان ژورنال: Journal of The Royal Society Interface
سال: 2010
ISSN: 1742-5689,1742-5662
DOI: 10.1098/rsif.2010.0287